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Journal Club


Summer 2017

Date Location Time Presenter Article Doc
May 8th, 2017 Centre, B.114 3 pm Simon Joly Zhang Y.-Y., Parepa M., Fischer M., Bossdorf O. 2016. Epigenetics of Colonizing Species? A Study of Japanese Knotweed in Central Europe. In: Barrett et al., Editors. Invasion Genetics. John Wiley & Sons, Ltd. p. 328–340.
May 15th, 2017 Centre, B.114 3 pm Gonzalo Bilbao Steinbauer M.J. et al. 2016. Topography-driven isolation, speciation and a global increase of endemism with elevation. Global Ecol. Biogeogr. 25:1097–1107.
May 29th, 2017 -- -- -- break
June 5th, 2017 Centre, B.114 3 pm Edeline Gagnon Simonsen A.K. et al. 2017. Symbiosis limits establishment of legumes outside their native range at a global scale. Nature Communications. 8:14790.
June 12th, 2017 Centre, B.114 3pm Simon Ingram T., Mahler D.L. 2013. SURFACE: detecting convergent evolution from comparative data by fitting Ornstein-Uhlenbeck models with stepwise Akaike Information Criterion. Methods Ecol Evol. 4:416–425.
June 19th, 2017 Centre, B.114 3pm Gonzalo Presentation rehearsal for Botany --

Winter 2017

Date Location Time Presenter Article Doc
Jan 16th, 2017 IRBV, D.362 3 pm Simon Joly Nachev V. et al. 2017. Cognition-mediated evolution of low-quality floral nectars. Science. 355:75–78.
Jan 23rd, 2017 IRBV, D.362 3 pm Tammy Elliott Linder H.P. 2005. Evolution of diversity: the Cape flora. Trends in Plant Science. 10:536–541.
Jan 30th, 2017 Centre, B.114 3 pm Anne Bruneau Marshall et al. 2016. Bioquality hotspots in the tropical African flora. Current Biology. 26:3214–3219.
Feb 13th, 2017 Centre, B.114 3 pm Étienne laliberté Teste F.P. et al. 2017. Plant-soil feedback and the maintenance of diversity in Mediterranean-climate shrublands. Science. 355:173–176.
Feb 20th, 2017 Centre, B.114 3 pm Sébastien Renaut Beissinger et al. 2016. Recent demography drives changes in linked selection across the maize genome. Nature Plants. 2:16084.
Feb 27th, 2017 Centre, B.114 3 pm TBA
March 6th, 2017 Centre, B.114 3 pm Gonzalo Bilbao Abrahamczyk S. et al. 2017. Pollinator adaptation and the evolution of floral nectar sugar composition. J. Evol. Biol. 30:112–127.
March 13th, 2017 Centre, B.114 3 pm TBA
March 20th, 2017 Centre, B.114 3 pm Jacynthe Masse Yeaman et al. 2016. Convergent local adaptation to climate in distantly related conifers. Science. 353:1431–1433.
March 27th, 2017 Centre, B.114 3 pm Sébastien Renaut Wright S.I. 2017. Evolution of genome size. eLS. John Wiley & Sons, Ltd.
April 10th, 2017 Centre, B.114 3 pm Simon Joly McDonald M.J., Rice D.P., Desai M.M. 2016. Sex speeds adaptation by altering the dynamics of molecular evolution. Nature. 531:233–236.
April 24th, 2017 Centre, B.114 3 pm Julie Faure Serrano-Serrano et al. 2017. Hummingbird pollination and the diversification of angiosperms: an old and successful association in Gesneriaceae. Proc R Soc London B. 284:20162816.

Fall 2016

Date Location Time Presenter Article Doc
Sept 12th, 2016 Centre, B.114 3 pm Sébastien Renaut Ziemann M. et al. 2016. Gene name errors are widespread in the scientific literature. Genome Biology. 17:177.
Sept 19th, 2016 Centre, B.114 3 pm Julie Faure Culbert B.M., Forrest J. 2016. Floral symmetry affects bumblebee approach consistency in artificial flowers. Journal of Pollination Ecology. 18.
Sept 26th, 2016 Centre, B.114 3 pm Simon Joly Spribille T. et al. 2016. Basidiomycete yeasts in the cortex of ascomycete macrolichens. Science. 353:488–492.
Oct 3rd, 2016 Centre, B.114 3 pm Sébastien Renaut Streicher J.W. et al. 2016. How Should Genes and Taxa be Sampled for Phylogenomic Analyses with Missing Data? An Empirical Study in Iguanian Lizards. Syst Biol. 65:128–145.
Oct 17th, 2016 IRBV, D.362 3 pm Boris Domenech Kozak K.H., Wiens J.J. 2010. Accelerated rates of climatic-niche evolution underlie rapid species diversification. Ecology Letters. 13:1378–1389.
Oct 24th, 2016 -- -- - No meeting...
Oct 31st, 2016 Centre, B.114 3 pm Étienne Laliberté Werner et al. 2014. A single evolutionary innovation drives the deep evolution of symbiotic N2-fixation in angiosperms. Nat Commun. 5:4087.
Nov 14th, 2016 Centre, B.114 3 pm Sébastien Renaut Skibba R. 2016. The polling crisis: How to tell what people really think. Nature News. 538:304.
Nov 21st, 2016 Centre, B.114 3 pm Anne Bruneau O’Meara et al. 2016. Non-equilibrium dynamics and floral trait interactions shape extant angiosperm diversity. Proc. R. Soc. B. 283:20152304.
Dec 12th, 2016 Centre, B.114 3 pm Alexis Carteron Phillips et al. 2013. The mycorrhizal-associated nutrient economy: a new framework for predicting carbon–nutrient couplings in temperate forests. New Phytologist. 199:41–51.

Summer 2016

Date Location Time Presenter Article Doc
May 2nd, 2016 Centre, B.114 3 pm Julie Faure Ollerton et al. 2009. A global test of the pollination syndrome hypothesis. Ann Bot. 103:1471–1480.
May 9th, 2016 Centre, B.114 3 pm Julie Faure Aigner. 2001. Optimality modeling and fitness trade-offs: when should plants become pollinator specialists? Oikos. 95:177–184.
R script for playing with Aigner's model with interactions: Aigner_negative_interactions.R
May 16th, 2016 Centre, B.114 noon Gonzalo Davis Rabosky et al. 2016. Coral snakes predict the evolution of mimicry across New World snakes. Nat Commun. 7:11484.
May 30th, 2016 IRBV, D.362 15h00 Boris Domenech Thomas et al. 2015. The historical origins of palaeotropical intercontinental disjunctions in the pantropical flowering plant family Annonaceae. Perspectives in Plant Ecology, Evolution and Systematics. 17:1–16.
June 6th, 2016 Centre, B.114 3pms Sébastien Renaut Mills J.A. et al. 2015. Archiving primary data: solutions for long-term studies. Trends in Ecology & Evolution. 30:581–589.
July 4th, 2016 Centre, B.114 3pm Boris Domenech Field trip in Brazil
July 18th, 2016 Centre, B.114 3pm Simon Joly Lindholm et al. 2016. The ecology and evolutionary dynamics of meiotic drive. Trends in Ecology & Evolution. 31:315–326.

Winter 2016

Date Location Time Presenter Article Doc
Jan 11th, 2016 Centre, B.114 3 pm Sébastien Renaut Prum R.O. et al. 2015. A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing. Nature. 526:569–573.
Jan 18th, 2016 Centre, B.114 3 pm Simon Joly Schweizer R.M. et al. 2016. Genetic subdivision and candidate genes under selection in North American grey wolves. Mol Ecol. 25:380–402.
Jan 25th, 2016 Centre, B.114 3 pm Luc Brouillet Spalink D. et al. 2016. Evolution of geographical place and niche space: Patterns of diversification in the North American sedge (Cyperaceae) flora. Mol Phylogenet and Evol. 95:183–195.
Feb 1st, 2016 Centre, B.114 3 pm Gonzalo Bilbao Donoghue & Sanderson. 2015. Confluence, synnovation, and depauperons in plant diversification. New Phytol. 207:260–274.
Feb 8th, 2016 Centre, B.114 3 pm Sébastien Renaut Ledford H. 2015. Crispr, the disruptor. Nature. 522:20-24.
Feb 15th, 2016 Centre, B.114 3 pm Hermine Alexandre Hermine will present simulation results that aim at determining the role of environmental fluxuations on the evolution of generalist strategies
Feb 22nd 2016 Centre, B.114 3 pm Simon Joly Discussion on preprints and post publication peer review (PPPR). These are trending subjects on social medias these days, which are associated with a meeting on the subject. See the site asapbio.org or the Twitter hashtag #ASAPbio for more information.
Feb 29th, 2016 -- -- -- Spring break
Mar 7th, 2016 -- -- -- Tahiana's defense -- No meeting
Mar 14th, 2016 Centre, B.114 3 pm Boris Domenech Pennington & Lavin. 2016. The contrasting nature of woody plant species in different neotropical forest biomes reflects differences in ecological stability. New Phytol. 210:25–37.
Mar 21st, 2016 Centre, B.114 3 pm -- Naciri Y. and Linder H.P. 2015. Species delimitation and relationships: The dance of the seven veils. Taxon. 64:3–16.
April 4th, 2016 Centre, B.114 3 pm Tahiana Strelin et al. 2016. Flower reshaping in the transition to hummingbird pollination in Loasaceae subfam. Loasoideae despite absence of corolla tubes or spurs. Evol Ecol.:1–17.
April 11th, 2016 Centre, B.114 3 pm Simon Joly Lagomarsino et al. 2016. The abiotic and biotic drivers of rapid diversification in Andean bellflowers (Campanulaceae). New Phytol.
April 18th, 2016 Centre, B.114 3 pm Tahiana Discussion on QUASSE and an empirical example on Angraecum.
April 25th, 2016 Centre, B.114 3 pm Simon Joly Présentation of complex results obtained with evolutionary models.
For reference: Butler & King. 2004. Phylogenetic Comparative Analysis: A Modeling Approach for Adaptive Evolution. The American Naturalist. 164:683–695.

Fall 2015

Date Location Time Presenter Article
28 sept 2015 Centre, B.114 3 pm Sébastien Renaut Egan et al. 2015. Experimental evidence of genome-wide impact of ecological selection during early stages of speciation-with-gene-flow. Ecol Lett. 18:817–825.
4 Oct 2015 Centre, B.114 3 pm Simon Joly Beaulieu et al. 2015. Heterogeneous Rates of Molecular Evolution and Diversification Could Explain the Triassic Age Estimate for Angiosperms. Syst Biol. 64:869–878.
12 Oct 2015 -- -- -- Thanksgiving
19 Oct 2015 -- -- -- Reading week
26 Oct 2015 Centre, B.114 3 pm François Lambert Phuong et al. 2014. Delimiting species in the genus Otospermophilus (Rodentia: Sciuridae), using genetics, ecology, and morphology. Biol J Linn Soc, 113:1136-1151. pdf
2 Nov 2015 Centre, B.114 3 pm Julie Faure Forrest. 2015. Plant–pollinator interactions and phenological change: what can we learn about climate impacts from experiments and observations? Oikos. 124:4–13. pdf
9 Nov 2015 Centre, B.114 3 pm François Lambert Presentation of his Master project.
16 Nov 2015 Centre, B.114 3 pm -- Discussion on Publons. Look at this paper in Nature on the subject to get started...
23 Nov 2015 Centre, B.114 3 pm Simon Joly Bordenstein and Theis. 2015. Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes. Plos Biol. 13(8):e1002226. pdf
30 Nov 2015 Centre, B.114 3 pm Sébastien Renaut Vines. 2015. The Core Inefficiency of Peer Review and a Potential Solution. Limnology and Oceanography Bulletin. 24:36-38. pdf
Axios Review
7 Dec 2015 Centre, B.114 3 pm Tahiana Andriananjamanantsoa Presentation of his paper on Angraecum biogeography
15 Dec 2015 Centre, B.114 3 pm Hermine Alexandre Boucher et al. 2014. Neutral biogeography and the evolution of climatic niches. The american naturalist. 183: 573--584